Publications

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Addis, Dustin T., William F. Patterson III., and Michael A. Dance. 2016. The potential for unreported artificial reefs to serve as refuges from fishing mortality for reef fishes. North American Journal of Fisheries Management 36:131-139.

Allen, Camryn D., Michelle N. Robbins, Tomoharu Eguchi, David W. Owens, Anne B. Meylan, Peter A. Meylan, Nicholas M. Kellar, Jeffrey A. Schwenter, Hendrik H. Nollens, Robin A. LeRoux, Peter H. Dutton, and Jeffrey A. Seminoff. 2015. First assessment of the sex ratio for an east Pacific green sea turtle foraging aggregation: Validation and application of a testosterone ELISA. PLoSONE 10(10):e0138861, 25 pp.

Bert, Theresa M., Stephen P. Geiger, Susan D. Gerhart, and Kevin J. McCarthy. 2016. Factors influencing reproductive attributes of stone crabs (Menippe) in Tampa Bay, Florida. Journal of Shellfish Research 35(1):1-17.

Bjorndal, Karen A., Milani Chaloupka, Vincent S. Saba, Carlos E. Diez, Robert P. van Dam, Barry H. Krueger, Julia A. Horrocks, Armando J.B. Santos, Claudio Bellini, Maria A.G. Marcovaldi, Mabel Nava, Sue Willis, Brendan J. Godley, Shannon Gore, Lucy A. Hawkes, Andrew McGowan, Matthew J. Witt, Thomas B. Stringell, Amdeep Sanghera, Peter B. Richardson, Annette C. Broderick, Quinton Phillips, Marta C. Calosso, John A.B. Claydon, Janice Blumenthal, Felix Moncada, Gonzalo Nodarse, Yosvani Medina, Stephen G. Dunbar, Lawrence D. Wood, Cynthia J. Lagueux, Cathi L. Campbell, Anne B. Meylan, Peter A. Meylan, Virginia R. Burns Perez, Robin A. Coleman, Samantha Strindberg, Vicente Guzman-H., Kristen M. Hart, Michael S. Cherkiss, Zandy Hillis-Starr, Ian F. Lundgren, Ralf H. Boulon Jr., Stephen Connett, Mark E. Outerbridge, and Alan B. Bolten. 2016. Somatic growth dynamics of West Atlantic hawksbill sea turtles: a spatio-temporal perspective. Ecosphere 7(5):e01279, 14 pp.

Brunell, Arnold M., Thomas R. Rainwater, Michael Sievering, and Steven G. Platt. 2015. A new record for the maximum length of the American alligator. Southeastern Naturalist 14:N38-N43.

Campbell, Matthew D., Adam G. Pollack, Christopher T. Gledhill, Theodore S. Switzer, and Douglas A. DeVries. 2015. Comparison of relative abundance indices calculated from two methods of generating video count data. Fisheries Research 170:125-133.

Castellón, Traci D., Betsie B. Rothermel, and Saif Z. Nomani. 2015. A comparison of line-transect distance sampling methods for estimating gopher tortoise population densities. Wildlife Society Bulletin 39:804-812.

Caudill, Gretchen and Danny Caudill. 2015. Melanism of coyotes (Canis latrans) in Florida. American Midland Naturalist 174:335-342.

Ceriani, Simona A., James D. Roth, Anton D. Tucker, Daniel R. Evans, David S. Addison, Christopher R. Sasso, Llewellyn M. Ehrhart, and John F. Weishampel. 2015. Carry-over effects and foraging ground dynamics of a major loggerhead breeding aggregation. Marine Biology 162:1955-1968.

Chambers, Lisa G., Yu-Ping Chin, Gabriel M. Filippelli, Christopher B. Gardner, Elizabeth M. Herndon, David T. Long, W. Berry Lyons, G.L. Macpherson, Shawn P. McElmurry, Colleen E. McLean, Joel Moore, Ryan P. Moyer, Klaus Neumann, Carmen A. Nezat, Keir Soderberg, Nadya Teutsch, and Elisabeth Widom. 2016. Developing the scientific framework for urban geochemistry. Applied Geochemistry 67:1-20.

Collins, A.B., L.R. Barbieri, R.S. McBride, E.D. McCoy, and P.J. Motta. 2015. Reef relief and volume are predictors of Goliath grouper presence and abundance in the eastern Gulf of Mexico. Bulletin of Marine Science 91(4):399-418.

Decker, Daniel, Christian Smith, Ann Forstchen, Darragh Hare, Emily Pomeranz, Catherine Doyle-Capitman, Krysten Schuler, and John Organ. 2016. Governance principles for wildlife conservation in the 21st century. Conservation Letters, 6 pp. doi: 10.1111/conl.12211.

Díaz-Jaimes, Píndaro, Natalia J. Bayona-Vásquez, Douglas H. Adams, and Manuel Uribe-Alcocer. 2016. Complete mitochondrial DNA genome of bonnethead shark, Sphyrna tiburo, and phylogenetic relationships among main superorders of modern elasmobranchs. Meta Gene 7:48-55.

Edwards, Holly H., and Bruce B. Ackerman, eds. 2016. Aerial surveys of manatee distribution in Florida, 1984–2004. Fish and Wildlife Research Institute Technical Report TR-19, iv + 273 pp.

Edwards, Holly H., Julien Martin, Charles J. Deutsch, Rorbert G. Muller, Stacie M. Koslovsky, Alexander J. Smith, and Margaret E. Barlas. 2016. Influence of manatees’ diving on their risk of collision with watercraft. PLoS ONE 11(4):e0151450.

Enge, Kevin M. and Kenneth D. Benfield. 2015. Lampropeltis elapsoides (scarlet kingsnake). Size record. Herpetological Review 46:209.

Enge, Kevin M., Garrett Craft, Jordan T. Schmitt, and Glenn L. Bartolotti. 2015. Lampropeltis extenuata (short-tailed kingsnake). Defensive behavior. Herpetological Review 46:451.

Enge, Kevin M., Cody D. Godwin, Paul E. Moler, and Jonathan D. Mays. 2015. Plestiodon egregius onocrepis (peninsula mole skink). Albinism. Herpetological Review 46:259.

Enge, Kevin M. and Kathleen Smith. 2015. Sistrurus miliarius barbouri (dusky pygmy rattlesnake). Albinism. Herpetological Review 46:454.

Enge, Kevin M. 2015. Thamnophis sauritus sackenii (peninsula ribbonsnake). Death feigning. Herpetological Review 46:455.

Escatel-Luna, Elena, Douglas H. Adams, Manuel Uribe-Alcocer, Valentina Islas-Villanueva, and Píndaro Díaz-Jaimes. 2015. Population genetic structure of the bonnethead shark, Sphyrna tiburo, from the western North Atlantic Ocean based on mtDNA sequences. Journal of Heredity 106(4):355-365.

Farmer, Nicholas A., Timothy A. Gowan, Jessica R. Powell, and Barbara J. Zoodsma. 2016. Evaluation of alternatives to winter closure of black sea bass pot gear: Projected impacts on catch and risk of entanglement with North Atlantic right whales Eubalaena glacialis. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:202-221.

Farmer, Nicholas A., Richard P. Malinowski, Mary F. McGovern, and Peter J. Rubec. 2016. Stock complexes for fisheries management in the Gulf of Mexico. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:177-201.

Fields, Andrew T., Kevin A. Feldheim, Gregg R. Poulakis, and Demian D. Chapman. 2015. Facultative parthenogenesis in a critically endangered wild vertebrate. Current Biology 25:R446–R447.

Fire, Spencer E., Leanne J. Flewelling, Megan Stolen, Wendy Noke Durden, Martine de Wit, Ann C. Spellman, and Zhihong Wang. 2015. Brevetoxin-associated mass mortality event of bottlenose dolphins and manatees along the east coast of Florida, USA. Marine Ecology Progress Series 526:241-251.

Flaherty-Walia, Kerry E., Theodore S. Switzer, Brent L. Winner, Amanda J. Tyler-Jedlund, and Sean F. Keenan. 2015. Improved ability to characterize recruitment of gray snapper in three Florida estuaries along the Gulf of Mexico through targeted sampling of polyhaline seagrass beds. Transactions of the American Fisheries Society 144(5):911-926.

Flaherty-Walia, Kerry E., Brent L. Winner, Amanda J. Tyler-Jedlund, and John P. Davis. 2016. Short-term discard mortality estimates for gray snapper in a west-central Florida estuary and adjacent nearshore Gulf of Mexico waters. North American Journal of Fisheries Management 36:329-340.

Gandy, Ryan, Charles Crawford, Claire Crowley, and David Chagaris. 2016. The effect of temperature on release mortality of declawed Menippe mercenaria in the Florida stone crab fishery. Bulletin of Marine Science 92, 16pp. doi: 10.5343/bms.2015.1036.

Goldsmith, Steven T., Ryan P. Moyer, and Russell J. Harmon. 2015. Hydrochemistry and biogeochemistry of tropical small mountain rivers. Applied Geochemistry 63:453-562.

Gore, Jeffery A., Mark S. Robson, Ricardo Zambrano, and Nancy J. Douglass. 2015. Roosting sites of a Florida bonneted bat (Eumops floridanus). Florida Field Naturalist 43(4):179-184.

Greene, Daniel U., Jeffery A. Gore, and Margo A. Stoddard. 2016. Reintroduction of the endangered Perdido Key beach mouse (Peromyscus polionotus trissyllepsis): fate and movements of captive-born animals. Florida Scientist 79(1):1-13.

Hall-Scharf, Brittany, J., Theodore S. Switzer, and Christopher D. Stallings. 2016. Ontogenetic and long-term diet shifts of a generalist juvenile predatory fish in an urban estuary undergoing dramatic changes in habitat availability. Transactions of the American Fisheries Society 145:502–520.

Harriger, Kathryn M., John R. Knight, and Matthew G. Wegener. 2015. Host-fish identifications for two Gulf coast-drainage freshwater mussels, Lampsilis straminea (southern fatmucket) and Quadrula succissa (purple pigtoe). Southeastern Naturalist 14(2):243-253.

Hewett Ragheb, Erin L., Cody Mezebish, and Bernard Lohr. 2015. Probable interspecific song learning in a Florida grasshopper sparrow (Ammodramus savannarum floridanus). The Wilson Journal of Ornithology 127(2):277-280.

Hu, Chuanmin, Brock Murch, Alina A. Corcoran, Lianyuan Zheng, Brian B. Barnes, Robert H. Weisberg, Karen Atwood, and Jason M. Lenes. 2015. Developing a smart semantic web with linked data and models for near-real-time monitoring of red tides in the eastern Gulf of Mexico. IEEE Systems Journal, pp. 1-9. doi: 10.1109/JSYST.2015.2440782.

Hu, Chuanmin, Brian B. Barnes, Lin Qi, and Alina A. Corcoran. 2015. A harmful algal bloom of Karenia brevis in the Northeastern Gulf of Mexico as revealed by MODIS and VIIRS: A comparison. Sensors 15:2873-2887.

Hu, Chuanmin, Robert Hardy, Eric Ruder, Amelia Geggel, Lian Feng, Sean Powers, Frank Hernandez, George Graettinger, Jill Bodnar, and Trent McDonald. 2016. Sargassum coverage in the northeastern Gulf of Mexico during 2010 from Landsat and airborne observations: Implications for the Deepwater Horizon oil spill impact assessment. Marine Pollution Bulletin 107:15–21.

Johnston, Gerald R., Travis M. Thomas, Eric Suarez, Anthony Lau, and Joseph C. Mitchell. 2015. Population structure and body size of the Suwannee alligator snapping turtle (Macrochelys suwanniensis) in northern Florida. Chelonian Conservation and Biology 14:73-81.

Kearney, Kelly A., Mark Butler, Robert Glazer, Christopher R. Kelble, Joseph E. Serafy, and Erik Stebenau. 2015. Quantifying Florida Bay habitat suitability for fishes and invertebrates under climate change scenarios. Environmental Management 55:836-856.

Kiryu, Yasu, and Jan H. Landsberg. Neurotropic mesomycetozoean-like infection in larvae of the southern toad Anaxyrus terrestris in Florida, USA. 2015. Diseases of Aquatic Organisms 113:157-162.

Lowerre-Barbieri, Susan K., Sarah L. Walters Burnsed, and Joel W. Bickford. 2016. Assessing reproductive behavior important to fisheries management: a case study with red drum, Sciaenops ocessatus. Ecological Applications 26(4):979-995.

McClintock, Brett T., Dave P. Onorato, and Julien Martin. 2015. Endangered Florida panther population size determined from public reports of motor vehicle collision mortalities. Journal of Applied Ecology 52:893-901.

Miquelle D.G., I. Ignacio Jiménez-Peréz, G. López, D. Onorato, V.V. Rozhnov, R. Arenas, E. Yu. Blidchenko, J. Boixader, M. Criffield, L. Fernández, G. Garrote, J.A. Hernandez-Blanco, S.V. Naidenko, M. López-Parra, T. del Rey, G. Ruiz, M.A. Simón, P.A. Sorokin, M. García-Tardío, and A.A. Yachmennikova. 2016. Rescue, rehabilitation, translocation, reintroduction, and captive rearing: Lessons from handling the other big cats. Pages 324-338 in: Snow Leopards, Thomas McCarthy and David Mallon, eds. Elsevier, London, United Kingdom.

Moravec, František, Micah D. Bakenhaster, and Douglas H. Adams. 2016. Two new species of Philometra Costa, 1845 (Nematoda: Philometridae) from Mycteroperca spp. (Serranidae) in the North-West Atlantic and northern Gulf of Mexico, USA. Systematic Parasitology 93:479-491.

Moyer, Ryan P., Christina E. Powell, David J. Gordon, Jacqueline S. Long, and Chelsea M. Bliss. 2015. Abundance, distribution, and fluxes of dissolved organic carbon (DOC) in four small sub-tropical rivers of the Tampa Bay Estuary (Florida,USA). Applied Geochemistry 63:550-562.

Munyandorero, Joseph. 2015. Composite per-recruits: Alternative metrics for deriving biological reference points of fishery resources. Regional Studies in Marine Science 2:35-55.

O’Bryhim, Jason R., Julia Spaet, J.R. Hyde, Kenneth L. Jones, Douglas H. Adams, and S.L. Lance. 2015. Development of microsatellite markers for globally distributed populations of the threatened silky shark, Carcharhinus falciformis. Conservation Genetics Resources 7:463-465.

O’Leary, Shannon J., Christopher M. Martinez, Hannes Baumann, Debra A. Abercrombie, Gregg R. Poulakis, Chrystal H. Murray, Kevin A. Feldheim, and Demian D. Chapman. 2016. Population genetics and geometric morphometrics of the key silverside, Menidia conchorum, a marine fish in a highly-fragmented, inland habitat. Bulletin of Marine Science 92(1):18 pp.

Richardson, Bill and Alina A. Corcoran. 2015. Use of dissolved inorganic and organic phosphorus by axenic and nonaxenic clones of Karenia brevis and Karenia mikimotoi. Harmful Algae 48:30-36.

Rubec, Peter J., Jesse Lewis, David Reed, Christi Santi, Robert H. Weisberg, Lianyuan Zheng, Chris Jenkins, Charles F. Ashbaugh, Curt Lashley, and Salvatore Versaggi. 2016. Linking oceanographic modeling and benthic mapping with habitat suitability models for pink shrimp on the West Florida Shelf. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:160-176.

Rubec, Peter J. 2016. Introduction to a special section: Spatial analysis, mapping, and management of marine fisheries. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:132-134.

Rubec, Peter J., Richard Kiltie, Erin Leone, Richard O. Flamm, Luke McEachron, and Christi Santi. 2016. Using delta-generalized additive models to predict spatial distributions and population abundance of juvenile pink shrimp in Tampa Bay, Florida. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:232-243.

Sayler, Katherine A., Amanda D. Loftis, Sarah K. Beatty, Carisa L. Boyce, Elina Garrison, Bambi Clemons, Mark Cunningham, Arthur R. Alleman, and Anthony F. Barbet. 2016. Prevalence of tick-borne pathogens in host-seeking Amblyomma americanum (Acari: Ixodidae) and Odocoileus virginianus (Artiodactyla: Cervidae) in Florida. Journal of Medical Entomology 8 pp. doi: 10.1093/jme/tjw054.

Seyoum, Seifu, Angela G. Collins, Cecilia Puchulutegui, Richard S. McBride, and Michael D. Tringali. 2015. Genetically determined population structure of hogfish (Labridae: Lachnolaimus maximus) in the southeastern United States. Fishery Bulletin 113:442-455.

Sharp, William C., and Gabriel A. Delgado. 2015. Predator-prey interactions between the corallivorous snail Coralliophilia abbreviata and the carnivorous deltoid rock snail Thais deltoidea. Biological Bulletin 229:129-133.

Switzer, Theodore S., Sean F. Keenan, Phillip W. Stevens, Robert H. McMichael Jr., and Timothy C. MacDonald. 2015. Incorporating ecology into survey design: Monitoring the recruitment of age-0 gags in the eastern Gulf of Mexico. North American Journal of Fisheries Management 35:1132–1143.

Tarnecki, Joseph H., Amy A. Wallace, James D. Simons, and Cameron H. Ainsworth. 2016. Progression of a Gulf of Mexico food web supporting Atlantis ecosystem model development. Fisheries Research 179:237-250.

Thompson, Brandon C., Daniel C. Gwinn, and Micheal S. Allen. 2015. Evacuation times of radio transmitters consumed by largemouth bass. North American Journal of Fisheries Management 35:621-625.

Thompson, Brandon C., Wesley F. Porak, Kimberly I. Bonvechio, Brandon L. Barthel, Micheal S. Allen, and Charles M. Adams. 2016. Economic and conservation impacts of stocking wild Florida bass into large Florida lakes. North American Journal of Fisheries Management 36:452-464.

Thompson, Brandon C., Wesley F. Porak, Erin H. Leone, and Micheal S. Allen. 2016. Using radiotelemetry to compare the initial behavior and mortality of hatchery-reared and wild juvenile Florida bass. Transactions of the American Fisheries Society 145(2):374-385.

Tremain, Derek M., and Adam M. Schaefer. 2015. Mercury concentrations in the prey of apex piscivores from a large subtropical estuary. Marine Pollution Bulletin 95(1):433-444.

Ward, Mark A., and Jonathan D. Mays. 2015. Cicindela marginata Fabricius (Carabidae: Cicindelinae) in the northeastern United States: A tiger beetle in decline? Northeastern Naturalist 22(1):192-199.

Whaley, Shannon D., Mary C. Christman, and James J. Burd Jr. 2016. Spatial distribution–Abundance relationships in juvenile (Age 0) red drum (Sciaenops ocellatus) and spotted seatrout (Cynoscion nebulosus). I: Influence of freshwater inflow. Estuaries and Coasts 39(3):742-751.